{ "_id": "6a1f06f6b401979e7341bd72", "Package": "presmTP", "Type": "Package", "Title": "Methods for Transition Probabilities", "Version": "1.1.0", "Date": "2019-10-04", "Author": "Gustavo Soutinho, Luis Meira-Machado and Pedro Oliveira", "Maintainer": "Gustavo Soutinho ", "Description": "Provides a function for estimating the transition\nprobabilities in an illness-death model. The transition\nprobabilities can be estimated from the unsmoothed landmark\nestimators developed by de Una-Alvarez and Meira-Machado (2015)\n. Presmoothed estimates can also be\nobtained through the use of a parametric family of binary\nregression curves, such as logit, probit or cauchit. The\nadditive logistic regression model and nonparametric regression\nare also alternatives which have been implemented. The idea\nbehind the presmoothed landmark estimators is to use the\npresmoothing techniques developed by Cao et al. (2005)\n in the landmark estimation of\nthe transition probabilities.", "Encoding": "UTF-8", "License": "GPL-3", "LazyData": "true", "RoxygenNote": "6.1.1", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-18 06:54:54 UTC", "User": "root" }, "Repository": "https://gsoutinho.r-universe.dev", "Date/Publication": "2019-11-01 10:20:02 UTC", "RemoteUrl": "https://github.com/cran/presmTP", "RemoteRef": "HEAD", "RemoteSha": "0de5d715933c587c320896a7fc8ccf81ec940508", "MD5sum": "5c99968ec317dd0e2fd80410c07ea731", "_user": "gsoutinho", "_type": "src", "_file": "presmTP_1.1.0.tar.gz", "_fileid": "322f5ed33d692bbf40d1e84b87b1a3d6ee1c923932664cfdb079b31eca36d682", "_filesize": 122936, "_sha256": "322f5ed33d692bbf40d1e84b87b1a3d6ee1c923932664cfdb079b31eca36d682", "_created": "2026-05-18T06:54:54.000Z", "_published": "2026-06-02T16:38:14.677Z", "_distro": "noble", "_jobs": [ { "job": 79122537672, "time": 116, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7051304227" }, { "job": 79122537380, "time": 113, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7051303494" }, { "job": 79122537495, "time": 104, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7051300827" }, { "job": 79122537556, "time": 129, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7051306855" }, { "job": 79122536798, "time": 169, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7051273271" }, { "job": 79122536840, "time": 78, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7363977001" }, { "job": 79122537869, "time": 151, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7051312577" }, { "job": 79122537733, "time": 86, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7051296524" }, { "job": 79122537484, "time": 78, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7051294460" } ], "_buildurl": "https://github.com/r-universe/gsoutinho/actions/runs/26018191407", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/presmTP", "_commit": { "id": "0de5d715933c587c320896a7fc8ccf81ec940508", "author": "Gustavo Soutinho ", "committer": "cran-robot ", "message": "version 1.1.0\n", "time": 1572603602 }, "_maintainer": { "name": "Gustavo Soutinho", "email": "gustavosoutinho@sapo.pt", "login": "gsoutinho", "description": "", "uuid": 2633897 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.0.0", "role": "Depends" }, { "package": "survPresmooth", "role": "Imports" }, { "package": "mgcv", "role": "Imports" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 1, "_contributors": [ { "user": "gsoutinho", "count": 1, "uuid": 2633897 } ], "_userbio": { "uuid": 2633897, "type": "user", "name": "gsoutinho" }, "_downloads": { "count": 189, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/presmTP" }, "_searchresults": 0, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/presmTP.html", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_realowner": "gsoutinho", "_cranurl": false, "_releases": [ { "version": "1.1.0", "date": "2019-11-01" } ], "_exports": [ "plot.pstp", "presmTP", "summary.pstp" ], "_datasets": [ { "name": "colonIDM", "title": "Chemotherapy for Stage B/C colon cancer.", "object": "colonIDM", "class": [ "data.frame" ], "fields": [ "time1", "event1", "Stime", "event", "rx", "sex", "age", "obstruct", "perfor", "adhere", "nodes", "differ", "extent", "surg", "node4" ], "rows": 929, "table": true, "tojson": true } ], "_help": [ { "page": "colonIDM", "title": "Chemotherapy for Stage B/C colon cancer.", "topics": [ "colonIDM" ] }, { "page": "plot.pstp", "title": "Plot for an object of class \"pstp\"", "topics": [ "plot.pstp" ] }, { "page": "presmTP", "title": "Methods for estimation of transition probabilities in the illness-death model", "topics": [ "presmTP" ] }, { "page": "summary.pstp", "title": "Summarizing fits of \"pstp\" class", "topics": [ "summary.pstp" ] } ], "_readme": "https://github.com/cran/presmTP/raw/HEAD/README.md", "_rundeps": [ "lattice", "Matrix", "mgcv", "nlme", "survPresmooth" ], "_score": 1.6989700043360187, "_indexed": true, "_nocasepkg": "presmtp", "_universes": [ "gsoutinho" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1.0", "date": "2026-05-18T06:56:43.000Z", "distro": "noble", "commit": "0de5d715933c587c320896a7fc8ccf81ec940508", "fileid": "ac9b0a44e53e97c6eefd30f53915a6ff0726d0aaa6cbd92bc14548aa17473cf5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gsoutinho/actions/runs/26018191407" }, { "r": "4.6.0", "os": "linux", "version": "1.1.0", "date": "2026-05-18T06:56:42.000Z", "distro": "noble", "commit": "0de5d715933c587c320896a7fc8ccf81ec940508", "fileid": "d5bd2ff6fdfd7214a13e8e911e130bc3fe182bb247bb118497afd4b72e4696b7", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gsoutinho/actions/runs/26018191407" }, { "r": "4.5.3", "os": "mac", "version": "1.1.0", "date": "2026-05-18T06:56:39.000Z", "commit": "0de5d715933c587c320896a7fc8ccf81ec940508", "fileid": "1d43127bff2f77e8dea3fa0617259daa61f473d53105999726445a9486df31de", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gsoutinho/actions/runs/26018191407" }, { "r": "4.6.0", "os": "mac", "version": "1.1.0", "date": "2026-05-18T06:56:53.000Z", "commit": "0de5d715933c587c320896a7fc8ccf81ec940508", "fileid": "6425ce37a7d8ca4b9571a277b66530f409c1c7af34a77eb17d36778f9b4da29e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gsoutinho/actions/runs/26018191407" }, { "r": "4.7.0", "os": "win", "version": "1.1.0", "date": "2026-05-18T06:57:14.000Z", "commit": "0de5d715933c587c320896a7fc8ccf81ec940508", "fileid": "12cd374a22bb943c900cd968a87ea1c176b920ff4464af71d040d6d373c74c3e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gsoutinho/actions/runs/26018191407" }, { "r": "4.5.3", "os": "win", "version": "1.1.0", "date": "2026-05-18T06:56:09.000Z", "commit": "0de5d715933c587c320896a7fc8ccf81ec940508", "fileid": "85f665efd46a903db3e71795a0b2694b1db8e484145f4457f06bcc8a288d609a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gsoutinho/actions/runs/26018191407" }, { "r": "4.6.0", "os": "win", "version": "1.1.0", "date": "2026-05-18T06:56:02.000Z", "commit": "0de5d715933c587c320896a7fc8ccf81ec940508", "fileid": "d3688bc5f0875676140de7e67fe165dbf78ab8bc5331582b1c95696a6ce2d943", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/gsoutinho/actions/runs/26018191407" }, { "r": "4.6.0", "os": "wasm", "version": "1.1.0", "date": "2026-06-02T16:37:51.000Z", "commit": "0de5d715933c587c320896a7fc8ccf81ec940508", "fileid": "4eceb44071e75f2cfcddab64ba303a6ee89642f00e260ef15540ef456f6d0c0f", "status": "success", "buildurl": "https://github.com/r-universe/gsoutinho/actions/runs/26018191407" } ] }