Package: markovMSM 0.1.3

markovMSM: Methods for Checking the Markov Condition in Multi-State Survival Data

The inference in multi-state models is traditionally performed under a Markov assumption that claims that past and future of the process are independent given the present state. In this package, we consider tests of the Markov assumption that are applicable to general multi-state models. Three approaches using existing methodology are considered: a simple method based on including covariates depending on the history in Cox models for the transition intensities; methods based on measuring the discrepancy of the non-Markov estimators of the transition probabilities to the Markov Aalen-Johansen estimators; and, finally, methods that were developed by considering summaries from families of log-rank statistics where patients are grouped by the state occupied of the process at a particular time point (see Soutinho G, Meira-Machado L (2021) <doi:10.1007/s00180-021-01139-7> and Titman AC, Putter H (2020) <doi:10.1093/biostatistics/kxaa030>).

Authors:Gustavo Soutinho [aut, cre], Luis Meira-Machado [aut]

markovMSM_0.1.3.tar.gz
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manual.pdf |manual.html
card.svg |card.png
markovMSM/json (API)
NEWS

# Install 'markovMSM' in R:
install.packages('markovMSM', repos = c('https://gsoutinho.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • colonMSM - Chemotherapy for Stage B/C colon cancer.
  • ebmt4 - Data from the European Society for Blood and Marrow Transplantation (EBMT).
  • prothr - Liver cirrhosis data - Abnormal prothrombin levels in liver cirrhosis.

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.95 score 18 scripts 267 downloads 9 exports 8 dependencies

Last updated from:223605b395. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK160
source / vignettesOK204
linux-release-x86_64OK148
macos-release-arm64OK137
macos-oldrel-arm64OK179
windows-develOK91
windows-releaseOK89
windows-oldrelOK108
wasm-releaseOK158

Exports:AUC.testeventsMSMLR.testPHM.testplot.markovMSMprepMSMprint.markovMSMsummary.markovMSMtransMatMSM

Dependencies:data.tablelatticeMatrixmstateRColorBrewerrlangsurvivalviridisLite

markovMSM: An R package for checking the Markov condition in multi-state survival data

Rendered fromVignette-markovMSM.Rmdusingknitr::rmarkdownon May 09 2026.

Last update: 2022-09-29
Started: 2022-09-29